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Healthy Sourdough Discard Kolaches

Healthy Sourdough Discard Kolaches are soft homemade pastries with a creamy cheesecake filling.
They use sourdough discard, spelt, and einkorn flour for rich flavor.
Perfect for brunch, breakfast, or make-ahead baking.
Prep Time 35 minutes
Course Breakfast, Brunch, Dessert
Cuisine Czech-inspired

Ingredients
  

For the dough

  • 3 tbsp white sugar
  • 3/4 cup whole grain spelt flour
  • 1/4 cup active sourdough discard unfed and straight from the fridge
  • 1/2 cup milk warmed to about 90°F
  • 1 cup all-purpose einkorn flour plus 2 to 4 tbsp for dusting
  • 1 large egg room temperature
  • 5 tbsp unsalted butter melted and cooled
  • 1 large egg yolk
  • 1 tsp sea salt

For the cream cheese filling

  • 6 oz cream cheese softened
  • 1/4 tsp pure vanilla extract
  • 1 to 2 tsp fresh lemon juice
  • 1/4 cup white sugar
  • 1 1/2 tsp all-purpose flour
  • Pinch of salt

For the streusel topping

  • 1 tbsp plus 1 tsp white sugar
  • 1/2 tbsp unsalted butter chilled and cut into small pieces
  • 1 tbsp plus 1 tsp all-purpose flour

Instructions
 

  • In the bowl of a stand mixer fitted with a dough hook, combine the all-purpose einkorn flour, spelt flour, and salt.
  • In a separate bowl, whisk together the warm milk, melted butter, sugar, egg, and egg yolk until well combined.
  • Stir in the sourdough discard until incorporated.
  • With the mixer on low speed, gradually pour the wet mixture into the flour mixture and mix until a shaggy dough forms with no dry flour remaining.
  • Increase the speed to medium-low and knead for 8 to 10 minutes, until the dough becomes smooth and elastic. Add extra flour a tablespoon at a time if needed.
  • Transfer the dough to a clean bowl, cover, let it rise at room temperature for 1 hour, then refrigerate overnight.
  • To make the filling, beat the cream cheese, sugar, flour, vanilla, and salt on low speed until smooth.
  • Add 1 teaspoon lemon juice, mix, and adjust to taste if needed. Cover and refrigerate.
  • To make the streusel, combine the flour, sugar, and chilled butter in a small bowl. Rub together with your fingers until the mixture resembles wet sand. Cover and refrigerate.
  • The next day, remove the dough from the refrigerator, punch it down, and place it on a lightly floured surface.
  • Line a rimmed baking sheet with parchment paper.
  • Shape the dough into a 9-inch log and cut into 9 equal pieces.
  • Form each piece into a ball, pinching the edges underneath and rounding the surface until smooth and taut.
  • Arrange the dough balls seam side down on the baking sheet, spacing them about 1 1/2 inches apart.
  • Cover and let rise for 2 to 3 hours, until increased in size by about half.
  • Preheat the oven to 350°F.
  • Grease the bottom of a 1/3-cup measuring cup with butter and dust lightly with flour.
  • Press firmly into the center of each dough ball to create an indentation.
  • Spoon about 1 1/2 tablespoons of filling into each indentation and smooth the tops.
  • Whisk the leftover egg white with a little water and brush the edges of the dough.
  • Sprinkle streusel over the edges, keeping it mostly off the filling.
  • Bake the Healthy Sourdough Discard Kolaches for 20 to 25 minutes, rotating the pan halfway through, until golden brown.
  • Cool on a wire rack for about 20 minutes before serving.

Notes

These pastries are best served slightly warm or at room temperature. You can swap the lemon juice for a little orange juice for a softer citrus note. For a more rustic flavor, keep the spelt and einkorn as written, but you can also use more all-purpose flour if needed for easier handling. Serve with coffee, tea, or fresh fruit for a cozy breakfast or brunch spread.